BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006B11SP1|AL425488
(990 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1425 1305 0.0
>3x_Contig1425
Length = 7919
Score = 1305 bits (652), Expect = 0.0
Identities = 721/751 (96%), Gaps = 2/751 (0%)
Strand = Plus / Minus
Query: 1 gatctttgcggcaatttttggataatcttaaatatataaacatacatgttcaggtatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 gatctttgcggcaatttttggataatcttaaatatataaacatacatgttcaggtatata 690
Query: 61 aacctaatatattgcwagtgaaagtcgcaaaataatgtcgtaccttattttgctgctgtt 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 aacctaatatattgcaagtgaaagtcgcaaaataatgtcgtaccttattttgctgctgtt 630
Query: 121 aaagtgggtttttcaattgaaatttacactccaaatggtaactgtccggggtaataaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aaagtgggtttttcaattgaaatttacactccaaatggtaactgtccggggtaataaatg 570
Query: 181 taaaaaagaaaaagaatttattgtttaatatakttgtcawaatwctgagagygctagtth 240
|||||||||||||||||||||||| |||| | ||||| ||| ||||||| || ||
Sbjct: 569 taaaaaagaaaaagaatttattgtcaaataaagatgtcaaaatactgagagcgcaag--a 512
Query: 241 atgggtaagtkwtyagctcatgaaggtttatttttacactatatgatatatatgatacac 300
| ||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aagggaaagtgatcagctcatgaaggtttatttttacactatatgatatatatgatacac 452
Query: 301 attttcttaatgtctatatatttctcgacgtgttcaatttcaatctcaatttcacaagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 attttcttaatgtctatatatttctcgacgtgttcaatttcaatctcaatttcacaagtt 392
Query: 361 gctgtwtggttttkttgttttttttttttktttctggtagtgagaattttttgcacaacg 420
||||| ||||||| ||| ||| | |||||||||||||||||||||||||||||
Sbjct: 391 gctgtatggttttgttgactttagcgtcagattctggtagtgagaattttttgcacaacg 332
Query: 421 tcacgatgtagccgttaataaaatcaatttctgtttctcttaaatgtaggacgtcctgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tcacgatgtagccgttaataaaatcaatttctgtttctcttaaatgtaggacgtcctgtc 272
Query: 481 tcattgaagatgagttacttccattcactatacatcccatataaatggtatttttcagtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tcattgaagatgagttacttccattcactatacatcccatataaatggtatttttcagtg 212
Query: 541 ttctttctaaattcaatctgccagtgacgtctagttctggtagattcccactttcagtat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 ttctttctaaattcaatctgccagtgacgtctagttctggtagattcccactttcagtat 152
Query: 601 ttctgaaggtctctggataatcgaataacggtttatatgcgatttggaatacatgaagag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 ttctgaaggtctctggataatcgaataacggtttatatgcgatttggaatacatgaagag 92
Query: 661 cctcttcgatgatcgaagtgaagattggttctgaacaattggctaattctccattcatgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 cctcttcgatgatcgaagtgaagattggttctgaacaattggctaattctccattcatgc 32
Query: 721 agtctataattgaagtgacagagttgataca 751
|||||||||||||||||||||||||||||||
Sbjct: 31 agtctataattgaagtgacagagttgataca 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,458
Number of Sequences: 1807
Number of extensions: 14458
Number of successful extensions: 1261
Number of sequences better than 1.0e-20: 1
length of query: 990
length of database: 10,358,551
effective HSP length: 16
effective length of query: 974
effective length of database: 10,329,639
effective search space: 10061068386
effective search space used: 10061068386
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)